Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHGBSecretogranin-1. (760 aa)    
Predicted Functional Partners:
SCG2
Secretogranin-2.
   
  
 0.927
SCG3
Secretogranin-3.
   
  
 0.734
SCG5
Neuroendocrine protein 7B2 isoform X1.
   
  
 0.692
NPFF
Neuropeptide FF-amide peptide precursor.
      
 0.633
TSHB
Thyrotropin subunit beta.
      
 0.627
ABR
Active breakpoint cluster region-related protein isoform X1.
    
 0.572
TPH1
LOW QUALITY PROTEIN: tryptophan 5-hydroxylase 1.
   
  
 0.566
LRRK1
Leucine-rich repeat serine/threonine-protein kinase 1 isoform X1.
   
 0.529
PCSK1
Proprotein convertase subtilisin/kexin type 1.
   
  
 0.525
FAM20C
Extracellular serine/threonine protein kinase FAM20C.
    
 0.510
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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