Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUNH20orf196Uncharacterized protein C20orf196 homolog. (248 aa)    
Predicted Functional Partners:
CTC1
LOW QUALITY PROTEIN: CST complex subunit CTC1.
    
 
 0.790
SHLD2
Protein FAM35A isoform X1.
   
 
 0.760
ANGEL2
Protein angel homolog 2 isoform X1.
      
 0.628
TATDN3
TatD DNase domain containing 3.
      
 0.628
MAD2L2
Mitotic spindle assembly checkpoint protein MAD2B isoform X1.
    
 
 0.619
BEND7
BEN domain-containing protein 7 isoform X1.
      
 0.611
RPS6KC1
Ribosomal protein S6 kinase delta-1 isoform X1.
      
 0.609
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.573
ST8SIA5
Alpha-N-acetyl-neuraminate alpha-2,8-sialyltransferase (sialyltransferase 8E).
      
 0.531
RIF1
Replication timing regulatory factor 1.
    
 
 0.496
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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