Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP21LOW QUALITY PROTEIN: rho GTPase-activating protein 21-like. (1210 aa)    
Predicted Functional Partners:
RND3
Rho-related GTP-binding protein RhoE.
    
 0.695
GRSF1
G-rich sequence factor 1.
   
  
 0.679
RND1
Rho-related GTP-binding protein Rho6.
    
 0.632
YWHAQ
14-3-3 protein beta/theta/zeta.
   
 
 0.625
CTNNB1
LOW QUALITY PROTEIN: catenin beta-1.
   
 
 0.622
CCDC85A
Coiled-coil domain-containing protein 85A isoform X1.
    
 
 0.602
CDC42
Cell division control protein 42 homolog isoform X1.
   
 0.588
ENSPCIP00000051338
annotation not available
   
 0.565
RPRD1B
Regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1.
      
 0.556
MRPS27
28S ribosomal protein S27, mitochondrial isoform X1.
      
 0.551
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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