Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000001967annotation not available (134 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthase domain-containing protein isoform X1.
   
    0.792
SMIM12
Small integral membrane protein 12.
   
  
 0.786
SNU13
U4/U6 small nuclear ribonucleoprotein SNU13.
   
  
 0.621
SQSTM1
Sequestosome-1 isoform X1.
    
 
 0.610
RAB40C
Ras-related protein Rab-40C.
   
 
  0.584
RHOH
Rho-related GTP-binding protein RhoH.
   
 
  0.557
NBR1
Next to BRCA1 gene 1 protein isoform X1.
    
 
 0.544
WDR6
WD repeat-containing protein 6 isoform X1.
   
    0.541
UTP15
LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 15 homolog.
   
    0.541
PSMD1
LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 1.
   
    0.541
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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