Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCC1LRCC1 like. (559 aa)    
Predicted Functional Partners:
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.931
ENSPCIP00000048603
annotation not available
    
 
 0.926
MTERF3
Transcription termination factor 3, mitochondrial.
    
  0.878
RPUSD4
RNA pseudouridylate synthase domain-containing protein 4.
    
 0.841
RPUSD3
RNA pseudouridylate synthase domain-containing protein 3 isoform X1.
    
 0.784
PDE6D
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta.
    
 
 0.783
PLA2G6
85/88 kDa calcium-independent phospholipase A2 isoform X1.
   
   0.702
APOB
Apolipoprotein B-100 isoform X1.
      
 0.686
FASTKD2
FAST kinase domain-containing protein 2, mitochondrial.
    
 0.666
UBE3C
Ubiquitin-protein ligase E3C isoform X1.
     
 0.664
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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