Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DMC1Meiotic recombination protein DMC1/LIM15 homolog. (339 aa)    
Predicted Functional Partners:
SPO11
Meiotic recombination protein SPO11 isoform X1.
   
 0.956
RAD51
DNA repair protein RAD51 homolog 1.
   
 0.952
XRCC3
DNA repair protein XRCC3 isoform X1.
   
 0.876
WRN
Werner syndrome ATP-dependent helicase.
  
 0.871
ENSPCIP00000053468
annotation not available
   
 
 0.861
XRCC2
X-ray repair cross complementing 2.
   
 0.850
TRIP13
Pachytene checkpoint protein 2 homolog isoform X1.
  
 0.849
HORMAD2
HORMA domain containing 2.
   
 
 0.847
RAD1
Cell cycle checkpoint protein RAD1.
   
 0.810
PSMC3IP
26S proteasome regulatory subunit, ATPase 3, interacting protein.
   
 0.804
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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