Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC6Tetratricopeptide repeat domain 6. (616 aa)    
Predicted Functional Partners:
HCFC2
Host cell factor 2 isoform X1.
   
 0.783
HCFC1
Host cell factor C1.
   
 0.783
MCRS1
Microspherule protein 1.
    
 0.767
KANSL2
KAT8 regulatory NSL complex subunit 2 isoform X1.
    
 0.723
OGA
Protein O-GlcNAcase / histone acetyltransferase.
   
 
 0.656
BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1.
    
 0.637
UCHL5
Ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1.
    
 0.637
KANSL3
KAT8 regulatory NSL complex subunit 3 isoform X1.
    
 0.610
TEX30
Testis-expressed protein 30 isoform X1.
    
 0.610
HIVEP2
Human immunodeficiency virus type I enhancer-binding protein.
    
 0.592
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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