STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXNL4BThioredoxin-like protein 4B. (149 aa)    
Predicted Functional Partners:
PRPF6
Pre-mRNA-processing factor 6.
    
 0.898
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 0.895
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.873
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
  0.865
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
 0.864
SART1
LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 1.
    
 0.842
PRPF31
U4/U6 small nuclear ribonucleoprotein PRP31.
    
 0.840
DDX23
Probable ATP-dependent RNA helicase DDX23.
    
 0.836
ZMAT2
U4/U6.U5 tri-snRNP component SNU23.
    
 0.831
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
  0.783
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.