Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIOX2Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA. (571 aa)    
Predicted Functional Partners:
RPL27A
Large subunit ribosomal protein L27Ae.
    
 0.784
ENSPCIP00000008838
annotation not available
    
 0.784
ENSPCIP00000013444
annotation not available
    
 0.784
ENSPCIP00000014485
annotation not available
    
 0.784
ENSPCIP00000043741
annotation not available
    
 0.784
ENSPCIP00000019677
annotation not available
    
 0.695
ENSPCIP00000027105
annotation not available
    
 0.695
RPL8
Large subunit ribosomal protein L8e.
    
 0.695
DIP2B
LOW QUALITY PROTEIN: disco-interacting protein 2 homolog B.
      
 0.627
TYW5
TRNA wybutosine-synthesizing protein 5.
      
 0.622
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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