STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FDFT1Farnesyl-diphosphate farnesyltransferase. (417 aa)    
Predicted Functional Partners:
SQLE
Squalene monooxygenase isoform X1.
  
 
 0.997
CYP51A1
Lanosterol 14-alpha demethylase.
  
 
 0.989
SC5D
Delta7-sterol 5-desaturase.
  
 
 0.985
HSD17B7
17beta-estradiol 17-dehydrogenase / 3beta-hydroxysteroid 3-dehydrogenase.
   
 
 0.980
FDPS
Farnesyl pyrophosphate synthase isoform X1.
  
 0.977
GGPS1
Geranylgeranyl pyrophosphate synthase isoform X1.
  
 0.971
ERG28
Probable ergosterol biosynthetic protein 28.
   
 
 0.969
PDSS1
Decaprenyl-diphosphate synthase subunit 1 isoform X1.
  
 0.955
NSDHL
Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1.
  
 
 0.914
FNTA
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1.
     
 0.906
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.