STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF821LOW QUALITY PROTEIN: zinc finger protein 821. (380 aa)    
Predicted Functional Partners:
TRMT61A
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
    
 
 0.567
TRMT6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1.
      
 0.557
RIN2
LOW QUALITY PROTEIN: ras and Rab interactor 2.
     
 0.506
DHX38
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16.
    
 
 0.480
ELF2
ETS-related transcription factor Elf-2 isoform X1.
  
 
 
 0.431
ELF1
LOW QUALITY PROTEIN: ETS-related transcription factor Elf-1.
  
 
 
 0.417
NCAPD2
Condensin complex subunit 1 isoform X1.
      
 0.408
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.