STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLA-DMAHLA class II histocompatibility antigen, DM alpha chain isoform X1. (264 aa)    
Predicted Functional Partners:
ENSPCIP00000026611
HLA class II histocompatibility antigen, DM beta chain isoform X1.
 
 
 0.999
CD74
HLA class II histocompatibility antigen gamma chain.
   
 0.990
CD4
T-cell surface glycoprotein CD4.
     
 0.920
CD247
T-cell surface glycoprotein CD3 zeta chain.
   
 
 0.905
ENSPCIP00000025010
Mamu class II histocompatibility antigen, DR alpha chain-like.
  
0.874
ENSPCIP00000025013
H-2 class II histocompatibility antigen, A-R alpha chain-like.
  
0.861
ENSPCIP00000010278
Rano class II histocompatibility antigen, A beta chain-like isoform X1.
   
 0.856
ENSPCIP00000033040
H-2 class II histocompatibility antigen, E-S beta chain-like.
   
 0.856
ENSPCIP00000042622
DLA class II histocompatibility antigen, DR-1 beta chain-like.
   
 0.856
ENSPCIP00000052276
DLA class II histocompatibility antigen, DR-1 beta chain-like.
   
 0.856
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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