STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP4Metalloproteinase inhibitor 4. (222 aa)    
Predicted Functional Partners:
MMP9
Matrix metalloproteinase-9 (gelatinase B).
   
 0.704
MMP14
LOW QUALITY PROTEIN: matrix metalloproteinase-14.
   
 0.696
MMP8
Matrix metalloproteinase-8 (neutrophil collagenase).
   
 0.637
HPX
Hemopexin.
   
 0.637
MMP7
Matrix metalloproteinase-7 (matrilysin, uterine).
   
 0.564
MMP1
Matrix metalloproteinase-1 (interstitial collagenase).
   
 0.562
MMP15
Matrix metalloproteinase-15 (membrane-inserted).
   
 0.530
MMP27
Matrix metalloproteinase-27.
   
 0.529
MMP24
Matrix metalloproteinase-24 (membrane-inserted).
   
 0.529
MMP13
Matrix metalloproteinase-13 (collagenase 3).
   
 0.529
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.