STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000002728annotation not available (261 aa)    
Predicted Functional Partners:
SPTLC1
Serine palmitoyltransferase 1.
      
 0.702
ACER2
Alkaline ceramidase 2.
    
 
 0.696
CERK
Ceramide kinase isoform X1.
    
 0.663
MED31
Mediator of RNA polymerase II transcription subunit 31.
      
 0.628
CERKL
Ceramide kinase-like protein isoform X1.
    
 0.599
ACER3
Alkaline ceramidase 3 isoform X1.
    
 
 0.592
ACER1
Alkaline ceramidase 1.
    
 
 0.589
SMPD2
LOW QUALITY PROTEIN: sphingomyelin phosphodiesterase 2.
      
 0.582
ASAH1
Acid ceramidase.
      
 0.562
GBA2
Non-lysosomal glucosylceramidase isoform X1.
      
 0.561
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.