STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT1LtRNA methyltransferase 1 like. (789 aa)    
Predicted Functional Partners:
TBL3
U3 small nucleolar RNA-associated protein 13.
   
    0.735
METTL1
TRNA (guanine-N(7)-)-methyltransferase.
   
 
 0.693
TRMT6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1.
   
  
 0.691
RPF2
Ribosome production factor 2 homolog.
   
  
 0.678
NSUN2
TRNA (cytosine(34)-C(5))-methyltransferase.
   
 
 0.673
SWT1
SWT1 RNA endoribonuclease homolog.
   
  
 0.646
TRMT11
TRNA (guanine(10)-N2)-methyltransferase homolog isoform X1.
   
 
 0.646
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
    0.622
TRUB1
LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1.
   
 
 0.618
THUMPD1
LOW QUALITY PROTEIN: THUMP domain-containing protein 1.
    
 
 0.601
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.