STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNCTenascin C. (1562 aa)    
Predicted Functional Partners:
CD40LG
Tumor necrosis factor ligand superfamily member 5.
    
   0.814
SVEP1
CUB and sushi domain-containing protein.
    
0.700
BCAN
Brevican core protein isoform X1.
   
 0.671
ITGA9
Integrin alpha 9.
    
 0.622
ITGB6
Integrin beta 6.
   
0.597
ITGAV
Integrin alpha V.
    
 0.595
ITGB3
Integrin beta 3.
   
0.580
TNR
Tenascin-R isoform X1.
     
0.568
FAM20C
Extracellular serine/threonine protein kinase FAM20C.
    
  0.550
ITGA4
Integrin alpha 4.
    
 0.521
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.