Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN10Calpain 10. (471 aa)    
Predicted Functional Partners:
ENSPCIP00000001944
annotation not available
 
 
 0.714
CAST
Calpastatin.
   
 0.702
ENSPCIP00000020257
annotation not available
 
 
 0.629
AGT
Angiotensinogen.
     
 0.550
CAPNS2
Calpain small subunit 2.
   
 0.514
AVPR1B
Arginine vasopressin receptor 1B.
      
 0.504
BFSP2
Phakinin isoform X1.
    
 0.470
ABCC8
ATP-binding cassette sub-family C member 8 isoform X1.
    
 
 0.461
RNPEPL1
LOW QUALITY PROTEIN: aminopeptidase RNPEPL1.
      
 0.408
RNPEP
Aminopeptidase B isoform X1.
      
 0.408
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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