STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9orf72Guanine nucleotide exchange protein C9orf72. (481 aa)    
Predicted Functional Partners:
WDR41
LOW QUALITY PROTEIN: WD repeat-containing protein 41.
    
 0.995
SMCR8
Smith-Magenis syndrome chromosomal region candidate gene 8 protein.
    
 0.995
ULK1
Serine/threonine-protein kinase ULK1 isoform X1.
    
 0.960
ATG13
LOW QUALITY PROTEIN: autophagy-related protein 13.
  
 
 0.959
RB1CC1
RB1-inducible coiled-coil protein 1 isoform X1.
    
 0.941
RAB39B
Ras-related protein Rab-39B.
    
 0.939
ULK2
Serine/threonine-protein kinase ULK2 isoform X1.
    
 0.937
ATG101
Autophagy-related protein 101 isoform X1.
    
 0.933
RAB1A
Ras-related protein Rab-1A isoform X1.
    
 0.930
RAB8A
Ras-related protein Rab-8A.
    
 0.921
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.