Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCN3BSodium voltage-gated channel beta subunit 3. (263 aa)    
Predicted Functional Partners:
SCN2B
Voltage-gated sodium channel type II beta.
  
 
 0.932
SCN5A
Sodium channel protein type 5 subunit alpha-like isoform X1.
   
 0.927
SCN4B
Voltage-gated sodium channel type IV beta.
   
 
 0.892
SCN8A
Sodium channel protein type 8 subunit alpha isoform X1.
   
 0.891
SCN10A
Sodium voltage-gated channel alpha subunit 10.
    
 0.844
SCN4A
LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha.
   
 0.783
SCN3A
Sodium channel protein type 3 subunit alpha isoform X1.
   
 0.775
ENSPCIP00000035222
Sodium channel protein type 9 subunit alpha isoform X1.
   
 0.775
SCN1A
Sodium channel protein type 1 subunit alpha isoform X1.
   
 0.775
SCN2A
Sodium channel protein type 2 subunit alpha isoform X1.
   
 0.775
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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