STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDF2Inactive rhomboid protein 2. (830 aa)    
Predicted Functional Partners:
ADAM17
Disintegrin and metalloproteinase domain-containing protein 17 isoform X1.
    
 0.573
PARL
LOW QUALITY PROTEIN: presenilins-associated rhomboid-like protein, mitochondrial.
      
 0.517
METTL23
Methyltransferase-like protein 23 isoform X1.
    
 
 0.472
ENSPCIP00000011893
annotation not available
    
 0.464
PRPSAP1
Phosphoribosyl pyrophosphate synthase-associated protein 1 isoform X1.
      
 0.461
CYGB
Cytoglobin isoform X1.
 
 
  
 0.438
NPRL3
Nitrogen permease regulator 3-like protein isoform X1.
      
 0.422
PHB2
Prohibitin-2 isoform X1.
   
 0.407
STOML1
Stomatin-like protein 1 isoform X1.
  
 0.402
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.