STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMG1Ribosomal RNA small subunit methyltransferase NEP1 isoform X1. (244 aa)    
Predicted Functional Partners:
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 0.999
KRR1
KRR1 small subunit processome component homolog.
  
 0.999
NOP14
Nucleolar protein 14.
   
 0.999
HEATR1
U3 small nucleolar RNA-associated protein 10.
   
 0.997
NOP58
Nucleolar protein 58.
   
 
 0.997
BYSL
Essential nuclear protein 1.
   
 
 0.997
UTP4
U3 small nucleolar RNA-associated protein 4 homolog.
   
 0.996
UTP11
Probable U3 small nucleolar RNA-associated protein 11.
   
 0.996
UTP20
LOW QUALITY PROTEIN: small subunit processome component 20 homolog.
   
 0.995
WDR43
WD repeat domain 43.
   
 0.995
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.