Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
HCCSHolocytochrome c synthase. (272 aa)    
Predicted Functional Partners:
ENSPCIP00000021066
Protoheme IX farnesyltransferase, mitochondrial.
   
 
 0.933
FECH
Protoporphyrin/coproporphyrin ferrochelatase.
     
 0.912
HMOX2
Heme oxygenase 2 isoform X1.
     
 0.907
HMOX1
Heme oxygenase 1.
     
 0.901
ENSPCIP00000038430
annotation not available
 
  
 
 0.834
TIMMDC1
LOW QUALITY PROTEIN: complex I assembly factor TIMMDC1, mitochondrial.
    
   0.817
ARHGAP6
Rho GTPase-activating protein 6 isoform X1.
      
 0.780
ARHGAP36
Rho GTPase-activating protein 36.
      
 0.780
PMPCB
Peptidase, mitochondrial processing beta subunit.
   
  
 0.748
ENSPCIP00000003904
Cytochrome c.
   
 0.719
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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