STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC3H1RING finger and CCCH-type zinc finger domain-containing protein. (1131 aa)    
Predicted Functional Partners:
CNOT1
CCR4-NOT transcription complex subunit 1 isoform X1.
   
 
 0.738
RC3H2
RING finger and CCCH-type zinc finger domain-containing protein.
  
 
  
0.621
TRAPPC10
Trafficking protein particle complex subunit 10 isoform X1.
    
 
 0.617
MYSM1
Histone H2A deubiquitinase MYSM1 isoform X1.
   
   0.599
CNOT11
CCR4-NOT transcription complex subunit 11 isoform X1.
    
 
 0.588
CNOT9
Cell differentiation protein RCD1 homolog.
    
 
 0.571
ZC3H12A
LOW QUALITY PROTEIN: endoribonuclease ZC3H12A.
   
  
 0.563
ICOS
Inducible T-cell co-stimulator.
      
 0.560
CNOT3
LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3.
    
 
 0.547
CNOT2
CCR4-NOT transcription complex subunit 2 isoform X1.
    
 
 0.528
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.