STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF7IPLOW QUALITY PROTEIN: activating transcription factor 7-interacting protein 1. (1099 aa)    
Predicted Functional Partners:
SETDB1
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1.
   
 0.966
SETDB2
Histone-lysine N-methyltransferase SETDB2 isoform X1.
   
 0.911
ARL14EP
ARL14 effector protein.
  
 
 
 0.887
KCTD1-2
LOW QUALITY PROTEIN: BTB/POZ domain-containing protein KCTD1.
 
    
 0.701
KCTD1
Potassium channel tetramerization domain containing 1.
      
 0.701
ARL14EPL
ARL14 effector protein-like.
    
 
 0.682
C1QC
Complement C1q subcomponent subunit C.
   
 0.556
PHF7
PHD finger protein 7.
   
 0.548
ZMYM4
Zinc finger MYM-type protein 4 isoform X1.
   
 0.528
RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2 isoform X1.
  
  
 0.525
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.