STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCNAB1Potassium voltage-gated channel Shaker-related subfamily A, beta member 1. (401 aa)    
Predicted Functional Partners:
KCNF1
Potassium voltage-gated channel subfamily F member 1.
   
 0.756
NUP133
Nuclear pore complex protein Nup133.
   
 0.735
NUP107
Nuclear pore complex protein Nup107.
   
 0.721
KCNA7
Potassium voltage-gated channel Shaker-related subfamily A member 7.
   
 0.711
KCNA4
Potassium voltage-gated channel Shaker-related subfamily A member 4.
   
 0.711
KCNA10
Potassium voltage-gated channel Shaker-related subfamily A member 10.
   
 0.711
KCNA2
Potassium voltage-gated channel Shaker-related subfamily A member 2.
   
 0.711
KCNA3
Potassium voltage-gated channel subfamily A member 3.
   
 0.711
KCNG4
LOW QUALITY PROTEIN: potassium voltage-gated channel subfamily G member 4.
   
 0.705
NUP85
Nuclear pore complex protein Nup85 isoform X1.
    
 0.675
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.