STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF830Zinc finger protein 830. (354 aa)    
Predicted Functional Partners:
PPIE
Peptidyl-prolyl cis-trans isomerase E isoform X1.
   
 0.980
AQR
Intron-binding protein aquarius.
    
 0.974
CRNKL1
Crooked neck-like protein 1.
   
 
 0.971
SNW1
SNW domain-containing protein 1.
    
 0.971
PRPF19
Pre-mRNA-processing factor 19.
    
 0.968
XAB2
Pre-mRNA-splicing factor SYF1.
    
 0.960
SF3B2
Splicing factor 3B subunit 2 isoform X1.
    
   0.931
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
   0.931
ENSPCIP00000000567
annotation not available
    
  0.930
RBM22
Pre-mRNA-splicing factor RBM22 isoform X1.
   
 
 0.884
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.