Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMC2Laminin subunit gamma-2. (1190 aa)    
Predicted Functional Partners:
LAMB3
Laminin subunit beta-3.
   
0.977
LAMB1
Laminin subunit beta-1.
   
 0.968
LAMB2
Laminin subunit beta-2.
   
 0.960
ENSPCIP00000001375
annotation not available
    
 0.909
ITGB4
LOW QUALITY PROTEIN: integrin beta-4.
   
 0.909
ITGA6
Integrin alpha-6 isoform X1.
   
 0.881
ITGA3
Integrin alpha 3.
   
 0.849
NTN1
LOW QUALITY PROTEIN: netrin-1.
 
      0.843
ITGB1
Integrin beta-1 isoform X1.
   
 0.822
ITGA11
Integrin alpha-11 isoform X1.
   
 0.822
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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