STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP3Plakophilin-3 isoform X1. (910 aa)    
Predicted Functional Partners:
PERP
P53 apoptosis effector related to PMP22.
   
 
 0.745
JUP
LOW QUALITY PROTEIN: junction plakoglobin.
   
 0.706
DSG1
Desmoglein 1.
   
 0.682
PKP1
Plakophilin-1 isoform X1.
  
 
0.637
DSG2
Desmoglein-2 isoform X1.
   
 0.625
DSG3
Desmoglein 3.
   
 0.625
DSC3
Desmocollin-2-like isoform X1.
   
 0.617
DSC1
LOW QUALITY PROTEIN: desmocollin-1.
   
 0.617
KRT8
Keratin, type II cytoskeletal 8.
   
 
 0.593
FXR1
LOW QUALITY PROTEIN: fragile X mental retardation syndrome-related protein 1.
    
 
 0.588
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.