STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEPSECSO-phospho-L-seryl-tRNASec:L-selenocysteinyl-tRNA synthase. (547 aa)    
Predicted Functional Partners:
PSTK
L-seryl-tRNA(Sec) kinase isoform X1.
     
 0.969
SEPHS2
Selenide, water dikinase 2.
     
 0.960
ENSPCIP00000036794
Selenide, water dikinase 2 isoform X1.
     
 0.960
SEPHS1
Selenide, water dikinase 1.
     
 0.960
EEFSEC
Selenocysteine-specific elongation factor isoform X1.
      
 0.705
SARS1
Serine--tRNA ligase, cytoplasmic.
     
 0.699
RIMS2
Regulating synaptic membrane exocytosis protein 2 isoform X1.
     
 0.639
SARS2
Serine--tRNA ligase, mitochondrial isoform X1.
     
 0.633
GLUD1
Glutamate dehydrogenase 1, mitochondrial.
   
 
 0.601
TSEN2
TRNA-splicing endonuclease subunit Sen2.
      
 0.576
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.