STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM36E3 ubiquitin-protein ligase TRIM36 isoform X1. (725 aa)    
Predicted Functional Partners:
HERC2
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2-like.
      
 0.560
RCOR1
REST corepressor 1.
    
 
 0.501
TMLHE
Trimethyllysine dioxygenase, mitochondrial.
      
 0.461
ENSPCIP00000046645
T-cell receptor-associated transmembrane adapter 1.
      
 0.461
ENSPCIP00000010889
annotation not available
    
 0.429
CUL9
LOW QUALITY PROTEIN: cullin-9.
    
 0.429
WFDC3
WAP four-disulfide core domain protein 3 isoform X1.
      
 0.426
TRIM39-RPP21
Tripartite motif-containing protein 39.
   
  
 0.424
ENSPCIP00000052248
annotation not available
   
  
 0.424
CCT6A
T-complex protein 1 subunit zeta.
    
 
 0.408
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.