STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM3Zinc finger SWIM domain-containing protein 3. (699 aa)    
Predicted Functional Partners:
MEAF6
Chromatin modification-related protein MEAF6 isoform X1.
   
 0.773
TRRAP
LOW QUALITY PROTEIN: transformation/transcription domain-associated protein.
   
 0.696
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.679
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 0.646
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.640
EPC1
Enhancer of polycomb homolog 1 isoform X1.
   
 0.574
EPC2
Enhancer of polycomb homolog 2 isoform X1.
   
 0.574
TAF6
Transcription initiation factor TFIID subunit 6 isoform X1.
   
 0.530
TAF6L
Transcription initiation factor TFIID subunit 6.
   
 0.530
SIN3A
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
   
 
 0.518
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.