STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNTTIP1Deoxynucleotidyltransferase terminal-interacting protein 1. (329 aa)    
Predicted Functional Partners:
ELMSAN1
LOW QUALITY PROTEIN: ELM2 and SANT domain-containing protein 1.
    
 
 0.945
TRERF1
Transcriptional-regulating factor 1 isoform X1.
    
 
 0.791
ZNF541
Zinc finger protein 541.
    
 
 0.766
KCTD19
BTB/POZ domain-containing protein KCTD19 isoform X1.
      
 0.727
HDAC2
Histone deacetylase 1/2.
    
 
 0.703
HDAC1
Histone deacetylase 1/2.
    
 
 0.703
DNTT
LOW QUALITY PROTEIN: DNA nucleotidylexotransferase.
    
 
 0.622
HDAC8
Histone deacetylase 8.
    
 
 0.593
HDAC3
Histone deacetylase 3.
    
 
 0.591
NUDC
LOW QUALITY PROTEIN: nuclear migration protein nudC.
      
 0.554
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.