STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPAP3RNA polymerase II-associated protein 3 isoform X1. (673 aa)    
Predicted Functional Partners:
PIH1D1
LOW QUALITY PROTEIN: PIH1 domain-containing protein 1.
   
 
 0.983
ENSPCIP00000011380
annotation not available
    
 0.964
RUVBL1
RuvB-like protein 1 (pontin 52).
    
 0.964
RUVBL2
RuvB-like protein 2.
    
 
 0.963
WDR92
WD repeat-containing protein 92.
   
 0.928
PFDN6
Prefoldin subunit 6 isoform X1.
   
 
 0.870
LEO1
RNA polymerase-associated protein LEO1.
   
 0.861
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1.
   
 0.857
ACTR5
Actin-related protein 5 isoform X1.
   
 0.846
PIH1D2
PIH1 domain-containing protein 2.
   
 
 0.838
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.