STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000006098Nuclear cap-binding protein subunit 2-like. (155 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap-binding protein subunit 1.
   
 0.997
SRRT
Serrate RNA effector molecule homolog isoform X1.
    
 0.970
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.969
THOC2
THO complex subunit 2 isoform X1.
    
 0.956
RBM8A
RNA-binding protein 8A.
   
 0.956
SNRPD1
Small nuclear ribonucleoprotein Sm D1 isoform X1.
   
 0.951
NELFE
Negative elongation factor E isoform X1.
    
 0.942
CDC40
Pre-mRNA-processing factor 17.
    
 0.938
ALYREF
THO complex subunit 4.
   
 0.924
PHAX
Phosphorylated adapter RNA export protein.
   
 0.921
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.