STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMPCAMitochondrial-processing peptidase subunit alpha isoform X1. (545 aa)    
Predicted Functional Partners:
CYC1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
   
 0.986
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.979
PMPCB
Peptidase, mitochondrial processing beta subunit.
  
0.978
NDUFV1
LOW QUALITY PROTEIN: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial.
   
 0.967
ENSPCIP00000015248
annotation not available
  
0.962
ENSPCIP00000030061
Cytochrome b-c1 complex subunit 1, mitochondrial.
  
0.961
NDUFS1
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial.
   
 0.957
NDUFS8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 
 0.943
ENSPCIP00000001119
annotation not available
   
 0.936
ENSPCIP00000038565
Ubiquinol-cytochrome c reductase subunit 7.
   
 0.936
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.