STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFXL1NF-X1-type zinc finger protein NFXL1. (916 aa)    
Predicted Functional Partners:
RPL5
60S ribosomal protein L5 isoform X1.
    
   0.506
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
      
 0.499
ENSPCIP00000002547
annotation not available
   
   0.497
ENSPCIP00000005738
annotation not available
   
   0.497
ENSPCIP00000008252
annotation not available
   
   0.497
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
   0.497
ENSPCIP00000014246
annotation not available
   
   0.497
ENSPCIP00000039865
annotation not available
   
   0.497
RPS20
LOW QUALITY PROTEIN: 40S ribosomal protein S20.
    
 
 0.494
RINT1
RAD50-interacting protein 1.
   
    0.487
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.