STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDD3Rhomboid domain-containing protein 3. (391 aa)    
Predicted Functional Partners:
FAM118A
Protein FAM118A isoform X1.
    
 
 0.688
PLD6
Mitochondrial cardiolipin hydrolase.
   
  
 0.594
LETM2
LETM1 domain-containing protein LETM2, mitochondrial.
      
 0.583
RHBDD2
Rhomboid domain-containing protein 2 isoform X1.
      
0.578
BBS9
Bardet-Biedl syndrome 9 protein.
      
 0.565
DYNC2H1
LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1.
      
 0.556
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.555
FAM118B
Protein FAM118B.
    
 
 0.493
RHBDL1
Rhomboid-related protein 1 isoform X1.
      
 0.481
SPATA5L1
Spermatogenesis associated 5 like 1.
    
 
 0.476
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.