STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL4139S ribosomal protein L41, mitochondrial. (134 aa)    
Predicted Functional Partners:
MRPS12
28S ribosomal protein S12, mitochondrial.
   
 
 0.996
MRPL17
39S ribosomal protein L17, mitochondrial.
   
 
 0.996
MRPL23
39S ribosomal protein L23, mitochondrial.
   
 
 0.996
MRPL13
39S ribosomal protein L13, mitochondrial isoform X1.
   
 
 0.995
ENSPCIP00000007609
annotation not available
   
 
 0.994
MRPL19
39S ribosomal protein L19, mitochondrial.
   
 
 0.992
DAP3
28S ribosomal protein S29, mitochondrial isoform X1.
    
 
 0.991
MRPL16
39S ribosomal protein L16, mitochondrial.
   
 0.990
MRPS16
28S ribosomal protein S16, mitochondrial isoform X1.
   
 
 0.990
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.990
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.