STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4FSemaphorin-4F isoform X1. (799 aa)    
Predicted Functional Partners:
PLXNB2
LOW QUALITY PROTEIN: plexin-B2.
   
 0.952
PLXNB3
LOW QUALITY PROTEIN: plexin-B3.
   
 0.944
PCGF1
Polycomb group RING finger protein 1 isoform X1.
      
 0.632
MET
Proto-oncogene tyrosine-protein kinase Met.
    
 0.629
MST1R
Macrophage stimulating 1 receptor.
    
 0.629
KCNIP4
Kv channel-interacting protein 4 isoform X1.
   
  
 0.621
PLXND1
Plexin-D1.
    
0.570
NRP1
Neuropilin-1 isoform X1.
    
 0.564
SLITRK4
SLIT and NTRK-like protein 4 isoform X1.
      
 0.558
SLIT1
Slit homolog 1 protein isoform X1.
      
 0.556
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.