STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHROOM2LOW QUALITY PROTEIN: protein Shroom2. (1685 aa)    
Predicted Functional Partners:
EMSY
BRCA2-interacting transcriptional repressor EMSY isoform X1.
      
 0.737
ACTR8
Actin-related protein 8.
    
 0.607
WWC3
Protein WWC3.
      
 0.584
ACTR5
Actin-related protein 5 isoform X1.
    
 0.574
CLCN4
H(+)/Cl(-) exchange transporter 4 isoform X1.
      
 0.561
GTF2H1
LOW QUALITY PROTEIN: general transcription factor IIH subunit 1.
    
 0.543
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit isoform X1.
   
 0.535
ENSPCIP00000007188
annotation not available
    
 0.528
GTF2H3
General transcription factor IIH subunit 3 isoform X1.
    
 0.525
ENSPCIP00000011380
annotation not available
    
 0.505
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.