STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAASAladin. (543 aa)    
Predicted Functional Partners:
NUP155
Nuclear pore complex protein Nup155 isoform X1.
   
 0.990
NUP188
Nucleoporin NUP188 homolog isoform X1.
   
 0.988
NUP205
Nuclear pore complex protein Nup205 isoform X1.
   
 0.983
ENSPCIP00000018193
RanBP2-like and GRIP domain-containing protein 3.
   
 0.982
ENSPCIP00000018195
E3 SUMO-protein ligase RanBP2-like.
   
 0.982
ENSPCIP00000052174
annotation not available
   
 0.982
SEH1L
Nucleoporin SEH1 isoform X1.
    
 0.981
NUP93
Nuclear pore complex protein Nup93 isoform X1.
   
 0.981
NUP54
Nuclear pore complex protein Nup54.
   
 0.979
NDC1
Nucleoporin NDC1 isoform X1.
   
 0.979
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.