Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
SYDE2LOW QUALITY PROTEIN: rho GTPase-activating protein SYDE2. (1041 aa)    
Predicted Functional Partners:
RASL11B
Ras-like protein family member 11B.
    
 0.830
ELP4
Elongator complex protein 4.
      
 0.668
GEN1
Flap endonuclease GEN homolog 1.
      
 0.627
ERC1
ELKS/Rab6-interacting/CAST family member 1 isoform X1.
    
 
 0.614
ERC2
ELKS/RAB6-interacting/CAST family member 2.
    
 
 0.614
GTPBP4
Nucleolar GTP-binding protein 1 isoform X1.
      
 0.594
RHOA
Ras homolog gene family, member A.
   
 0.582
PPP4R3A
Serine/threonine-protein phosphatase 4 regulatory subunit 3A isoform X1.
   
 
 0.582
ENSPCIP00000032780
annotation not available
   
 0.582
RHOB
Rho-related GTP-binding protein RhoB.
   
 0.582
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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