STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALCOCO1Calcium-binding and coiled-coil domain-containing protein 1 isoform X1. (735 aa)    
Predicted Functional Partners:
CRLF3
Cytokine receptor-like factor 3 isoform X1.
      
 0.743
PHF5A
PHD finger-like domain-containing protein 5A.
      
 0.628
ARNT
LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear translocator.
    
   0.604
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2 isoform X1.
    
   0.604
EP300
E1A binding protein p300.
    
 
 0.599
TP53BP1
Tumor suppressor p53-binding protein 1 isoform X1.
    
 0.597
CCPG1
Cell cycle progression protein 1 isoform X1.
   
 0.564
NDC80
Kinetochore protein NDC80 homolog isoform X1.
   
 
 0.539
CA10
Carbonic anhydrase-related protein 10.
    
   0.518
TEX264
Testis expressed 264, ER-phagy receptor.
      
 0.517
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.