STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOXHD1LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1. (1102 aa)    
Predicted Functional Partners:
SLC12A2
Solute carrier family 12 member 2.
    
 0.697
SLC4A7
Solute carrier family 4 member 7.
   
  
 0.629
RNF213
Ring finger protein 213.
    
 0.616
ADGRV1
LOW QUALITY PROTEIN: G-protein coupled receptor 98.
  
   
 0.601
MYO3A
Myosin-IIIa.
   
 
 0.591
SKOR2
SKI family transcriptional corepressor 2.
      
 0.585
RNF165
E3 ubiquitin-protein ligase RNF165 isoform X1.
    
 
 0.571
AGBL1
ATP/GTP binding protein like 1.
     
 0.570
EVPL
LOW QUALITY PROTEIN: envoplakin.
    
 0.558
TATDN3
TatD DNase domain containing 3.
      
 0.558
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.