STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYNC2LI1LOW QUALITY PROTEIN: cytoplasmic dynein 2 light intermediate chain 1. (350 aa)    
Predicted Functional Partners:
DYNC2H1
LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1.
    
 0.972
WDR60
LOW QUALITY PROTEIN: WD repeat-containing protein 60.
    
 0.963
ENSPCIP00000037670
annotation not available
    
 0.963
WDR34
WD repeat-containing protein 34.
    
 0.946
ENSPCIP00000037671
annotation not available
   
 0.906
DYNLRB2
Dynein light chain roadblock-type 2 isoform X1.
    
 0.862
DYNLRB1
Dynein light chain roadblock-type 1.
    
 0.862
IFT80
Intraflagellar transport protein 80 homolog isoform X1.
     
 0.829
IFT88
Intraflagellar transport 88.
   
 0.819
IFT57
Intraflagellar transport protein 57 homolog.
     
 0.813
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.