STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1BProtein phosphatase 1B isoform X1. (479 aa)    
Predicted Functional Partners:
MAP3K7
Mitogen-activated protein kinase kinase kinase 7 isoform X1.
   
 0.919
ISG15
Ubiquitin cross-reactive protein.
   
 0.752
SLC3A1
Solute carrier family 3 (neutral and basic amino acid transporter), member 1.
 
 
  
 0.747
PPM1A
Protein phosphatase 1A isoform X1.
  
  
0.676
SMAD4
Mothers against decapentaplegic homolog 4.
   
 0.604
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
   
 
 0.590
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1.
   
 0.545
UBC
LOW QUALITY PROTEIN: polyubiquitin-C.
   
 0.538
ENSPCIP00000043051
LOW QUALITY PROTEIN: polyubiquitin-C-like.
   
 0.538
PREPL
Prolyl endopeptidase-like isoform X1.
   
  
 0.535
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.