STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USO1General vesicular transport factor p115 isoform X1. (964 aa)    
Predicted Functional Partners:
STX5
Syntaxin 5.
    
 0.995
GOSR2
Golgi SNAP receptor complex member 2 isoform X1.
    
 0.993
BET1
Blocked early in transport 1.
    
 0.984
BET1L
Blocked early in transport 1.
    
 0.983
GOSR1
Golgi SNAP receptor complex member 1 isoform X1.
    
 0.979
GOLGB1
Golgin subfamily B member 1 isoform X1.
   
 0.962
SCFD1
Sec1 family domain-containing protein 1 isoform X1.
   
 0.955
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
   
 0.936
RAB1B
RAB1B, member RAS oncogene family.
   
 0.927
RAB1A
Ras-related protein Rab-1A isoform X1.
   
 0.927
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.