STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCHY1RING finger and CHY zinc finger domain-containing protein 1 isoform X1. (261 aa)    
Predicted Functional Partners:
TP53
Cellular tumor antigen p53.
    
 0.990
POLH
DNA polymerase eta.
    
 0.948
POLI
DNA polymerase iota isoform X1.
    
 0.770
AR
LOW QUALITY PROTEIN: androgen receptor.
    
 
 0.677
RFC3
Replication factor C subunit 3/5.
   
 
  0.673
RFC4
Replication factor C subunit 2/4.
   
 
 0.663
RFC2
Replication factor C subunit 2/4.
   
 
 0.663
RFC5
Replication factor C subunit 3/5.
   
 
  0.662
RFC1
Replication factor C subunit 1 isoform X1.
     
 0.660
CHCHD4
Mitochondrial intermembrane space import and assembly protein 40.
    
 
 0.606
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.