STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBBeta-taxilin isoform X1. (695 aa)    
Predicted Functional Partners:
STX3
Syntaxin 3.
    
 0.579
STX4
Syntaxin 4.
    
 0.577
TMEM236
Transmembrane protein 236.
      
 0.564
IFT80
Intraflagellar transport protein 80 homolog isoform X1.
      
 0.563
PRPF6
Pre-mRNA-processing factor 6.
      
 0.562
ENSPCIP00000051303
annotation not available
      
 0.561
RNF122
RING finger protein 122 isoform X1.
      
 0.555
TXLNA
Alpha-taxilin.
  
 
  
0.541
ZFYVE26
Zinc finger FYVE domain-containing protein 26 isoform X1.
      
 0.487
HRC
Sarcoplasmic reticulum histidine-rich calcium-binding protein.
   
    0.481
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.