STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCIP00000008611annotation not available (486 aa)    
Predicted Functional Partners:
CTDP1
RNA polymerase II subunit A C-terminal domain phosphatase isoform X1.
   
 0.942
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
   
 0.939
GTF2B
Transcription initiation factor TFIIB.
    
 0.938
GTF2E2
Transcription initiation factor TFIIE subunit beta.
   
 0.938
GTF2E1
Transcription initiation factor TFIIE subunit alpha.
    
 0.938
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
   
 0.933
ENSPCIP00000015147
annotation not available
    
 0.923
POLR2E
DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1.
   
 0.920
GTF2H4
General transcription factor IIH subunit 4.
    
 0.919
GTF2A2
LOW QUALITY PROTEIN: transcription initiation factor IIA subunit 2.
    
 0.916
Your Current Organism:
Phascolarctos cinereus
NCBI taxonomy Id: 38626
Other names: P. cinereus, koala
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